EnhancerDB
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  3. rs4912002[chr1:19793402]
Enhancers that have rs4912002[chr1:19793402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4912002[chr1:19793402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19793395 19793409 IRF7 JASPAR yes 27194479
chr1 19793397 19793403 TCF4 TRANSFAC yes 27194480
chr1 19793397 19793412 FOXP1 JASPAR yes 27194481
chr1 19793398 19793413 STAT2 JASPAR yes 27194482
chr1 19793401 19793413 IRF1 JASPAR yes 27194483
chr1 19793401 19793415 IRF7 JASPAR yes 27194484
Genes associated with rs4912002[chr1:19793402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More