EnhancerDB
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  3. rs4912099[chr1:19797740]
Enhancers that have rs4912099[chr1:19797740]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4912099[chr1:19797740]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19797720 19797741 IRF1 JASPAR yes 27195091
chr1 19797736 19797746 NFATC3 JASPAR yes 27195099
chr1 19797738 19797745 NFATC2 JASPAR yes 27195100
Genes associated with rs4912099[chr1:19797740], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More