EnhancerDB
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  3. rs4912100[chr1:19798007]
Enhancers that have rs4912100[chr1:19798007]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4912100[chr1:19798007]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19798000 19798010 MAX JASPAR yes 27195120
chr1 19798000 19798011 USF1 JASPAR yes 27195121
chr1 19798000 19798011 USF2 JASPAR yes 27195122
chr1 19798001 19798011 BHLHE40 JASPAR yes 27195123
chr1 19798001 19798011 BHLHE41 JASPAR yes 27195124
chr1 19798001 19798011 MLXIPL JASPAR yes 27195125
chr1 19798001 19798011 MLX JASPAR yes 27195126
chr1 19798001 19798011 SREBF1 JASPAR yes 27195127
chr1 19798001 19798011 SREBF2 JASPAR yes 27195128
chr1 19798001 19798011 TFE3 JASPAR yes 27195129
chr1 19798001 19798011 TFEB JASPAR yes 27195130
chr1 19798001 19798011 TFEC JASPAR yes 27195131
chr1 19798001 19798012 USF1 JASPAR yes 27195132
chr1 19798001 19798012 USF2 JASPAR yes 27195133
chr1 19798002 19798012 MAX JASPAR yes 27195134
chr1 19798003 19798008 MYC TRANSFAC yes 27195135
chr1 19798003 19798008 USF1 TRANSFAC yes 27195136
chr1 19798003 19798008 USF2 TRANSFAC yes 27195137
Genes associated with rs4912100[chr1:19798007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More