EnhancerDB
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  3. rs4916250[chr1:172328772]
Enhancers that have rs4916250[chr1:172328772]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4916250[chr1:172328772]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172328760 172328775 FOXP1 JASPAR yes 33125900
chr1 172328762 172328777 FOXP1 JASPAR yes 33125901
chr1 172328762 172328777 MEF2C JASPAR yes 33125902
chr1 172328762 172328783 IRF1 JASPAR yes 33125903
chr1 172328763 172328778 FOXP1 JASPAR yes 33125904
chr1 172328764 172328779 FOXP1 JASPAR yes 33125905
chr1 172328765 172328780 FOXP1 JASPAR yes 33125906
chr1 172328765 172328786 IRF1 JASPAR yes 33125907
chr1 172328766 172328772 TBP TRANSFAC yes 33125908
chr1 172328766 172328781 FOXP1 JASPAR yes 33125909
chr1 172328769 172328784 STAT2 JASPAR yes 33125910
Genes associated with rs4916250[chr1:172328772], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More