EnhancerDB
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  3. rs4924588[chr15:42212374]
Enhancers that have rs4924588[chr15:42212374]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4924588[chr15:42212374]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42212364 42212378 ONECUT1 JASPAR yes 23005195
chr15 42212367 42212377 CUX1 JASPAR yes 23005196
chr15 42212367 42212377 CUX2 JASPAR yes 23005197
chr15 42212370 42212382 HNF1B JASPAR yes 23005198
chr15 42212372 42212384 FOXC2 JASPAR yes 23005199
chr15 42212372 42212386 FOXF2 JASPAR yes 23005200
chr15 42212373 42212384 FOXB1 JASPAR yes 23005201
chr15 42212373 42212384 FOXC1 JASPAR yes 23005202
chr15 42212374 42212378 YY1 TRANSFAC yes 23005203
Genes associated with rs4924588[chr15:42212374], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More