EnhancerDB
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  3. rs4925468[chr1:229367723]
Enhancers that have rs4925468[chr1:229367723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4925468[chr1:229367723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229367075 229367725 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390867
chr1 229367528 229367818 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21390878
chr1 229367538 229367768 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21390879
chr1 229367545 229367769 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21390880
chr1 229367572 229367762 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21390881
chr1 229367705 229367725 RREB1 JASPAR yes 35977895
chr1 229367712 229367732 RREB1 JASPAR yes 35977902
Genes associated with rs4925468[chr1:229367723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More