EnhancerDB
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Enhancers that have rs4940657[chr18:55869231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs4940657[chr18:55869231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55869222 55869231 TFAP2A JASPAR yes 110925595
chr18 55869224 55869233 HIC2 JASPAR yes 110925596
chr18 55869227 55869231 LFA1 TRANSFAC yes 110925597
chr18 55869227 55869239 BHLHE23 JASPAR yes 110925598
chr18 55869227 55869239 PKNOX2 JASPAR yes 110925599
chr18 55869227 55869239 TGIF2 JASPAR yes 110925600
chr18 55869228 55869238 BHLHE22 JASPAR yes 110925601
chr18 55869228 55869238 NEUROD2 JASPAR yes 110925602
chr18 55869228 55869238 NEUROG2 JASPAR yes 110925603
chr18 55869228 55869238 OLIG1 JASPAR yes 110925604
chr18 55869228 55869238 OLIG2 JASPAR yes 110925605
chr18 55869228 55869238 OLIG3 JASPAR yes 110925606
Genes associated with rs4940657[chr18:55869231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More