EnhancerDB
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  3. rs4947290[chr6:30794405]
Enhancers that have rs4947290[chr6:30794405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4947290[chr6:30794405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30794396 30794405 ZEB1 JASPAR yes 101055869
chr6 30794396 30794409 ZBTB18 JASPAR yes 101055870
chr6 30794397 30794407 ID4 JASPAR yes 101055871
chr6 30794397 30794407 TCF3 JASPAR yes 101055872
chr6 30794397 30794407 TCF4 JASPAR yes 101055873
Genes associated with rs4947290[chr6:30794405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More