EnhancerDB
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  3. rs497019[chr1:234638825]
Enhancers that have rs497019[chr1:234638825]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs497019[chr1:234638825]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234638296 234640396 ZNF274 GTRD no Liver (HepG2) 21393522
chr1 234638296 234640396 ZNF274 GTRD no Liver (HepG2) 107880067
chr1 234638298 234640490 ZNF274 GTRD no Liver (HepG2) 21393523
chr1 234638298 234640490 ZNF274 GTRD no Liver (HepG2) 107880068
chr1 234638328 234640463 ZNF274 GTRD no Liver (HepG2) 21393524
chr1 234638328 234640463 ZNF274 GTRD no Liver (HepG2) 107880069
chr1 234638453 234640289 ZBTB33 GTRD no Lung (A549) 107880070
chr1 234638518 234640627 ZBTB33 GTRD no Lung (A549) 107880071
chr1 234638537 234639710 ZNF274 GTRD no Liver (HepG2) 21393526
chr1 234638556 234639820 ZNF274 GTRD no Liver (HepG2) 21393527
chr1 234638563 234639621 ZNF274 GTRD no Liver (HepG2) 21393528
chr1 234638575 234639656 ZNF143 GTRD no Epithelial (MCF-7) 21393529
chr1 234638579 234639616 ZNF143 GTRD no Epithelial (MCF-7) 21393530
chr1 234638580 234640751 ZBTB33 GTRD no Lung (A549) 107880072
chr1 234638587 234639717 ZNF274 GTRD no Liver (HepG2) 21393531
chr1 234638595 234638885 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21393532
chr1 234638599 234639724 ZNF143 GTRD no Epithelial (MCF-7) 21393533
chr1 234638636 234638996 ZNF274 GTRD no Liver (HepG2) 21393534
chr1 234638636 234639676 ZNF143 GTRD no Epithelial (MCF-7) 21393535
chr1 234638646 234639707 ZNF143 GTRD no Epithelial (MCF-7) 21393536
chr1 234638661 234639926 ZNF274 GTRD no Liver (HepG2) 21393537
chr1 234638663 234640568 ZBTB33 GTRD no Lung (A549) 107880073
chr1 234638679 234639746 ZNF143 GTRD no Epithelial (MCF-7) 21393538
chr1 234638681 234639666 ZNF143 GTRD no Epithelial (MCF-7) 21393539
chr1 234638689 234639744 ZNF143 GTRD no Epithelial (MCF-7) 21393540
chr1 234638692 234639594 ZNF143 GTRD no Epithelial (MCF-7) 21393541
chr1 234638713 234639670 ZNF143 GTRD no Epithelial (MCF-7) 21393542
chr1 234638746 234639450 ZNF143 GTRD no Epithelial (MCF-7) 21393543
chr1 234638749 234639657 ZNF143 GTRD no Epithelial (MCF-7) 21393544
chr1 234638750 234639628 ZNF143 GTRD no Epithelial (MCF-7) 21393545
chr1 234638756 234640494 ZNF274 GTRD no Liver (HepG2) 21393546
chr1 234638756 234640494 ZNF274 GTRD no Liver (HepG2) 107880074
chr1 234638757 234639665 ZNF143 GTRD no Epithelial (MCF-7) 21393547
chr1 234638775 234640004 ZBTB33 GTRD no Lung (A549) 107880075
chr1 234638786 234639460 ZNF143 GTRD no Epithelial (MCF-7) 21393548
chr1 234638792 234639862 ZNF274 GTRD no Liver (HepG2) 21393549
chr1 234638806 234639513 ZNF143 GTRD no Epithelial (MCF-7) 21393550
chr1 234638807 234640513 ZBTB33 GTRD no Lung (A549) 107880076
chr1 234638817 234638828 DMRT3 JASPAR yes 36280066
chr1 234638817 234639531 ZNF143 GTRD no Epithelial (MCF-7) 21393551
chr1 234638819 234638833 ONECUT1 JASPAR yes 36280067
chr1 234638819 234638833 ONECUT2 JASPAR yes 36280068
chr1 234638819 234638833 ONECUT3 JASPAR yes 36280069
Genes associated with rs497019[chr1:234638825], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More