EnhancerDB
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  3. rs497254[chr18:55878917]
Enhancers that have rs497254[chr18:55878917]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs497254[chr18:55878917]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55878904 55878922 SRF JASPAR yes 110927266
chr18 55878912 55878924 POU2F1 JASPAR yes 110927267
chr18 55878912 55878926 POU1F1 JASPAR yes 110927268
chr18 55878913 55878925 POU3F1 JASPAR yes 110927269
chr18 55878913 55878925 POU3F2 JASPAR yes 110927270
chr18 55878913 55878934 IRF1 JASPAR yes 110927271
chr18 55878916 55878923 NFATC2 JASPAR yes 110927272
chr18 55878917 55878931 STAT1 JASPAR yes 110927273
chr18 55878917 55878932 STAT2 JASPAR yes 110927274
Genes associated with rs497254[chr18:55878917], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More