EnhancerDB
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  3. rs4973476[chr2:232554437]
Enhancers that have rs4973476[chr2:232554437]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4973476[chr2:232554437]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232554432 232554441 SP1 TRANSFAC yes 81737022
chr2 232554433 232554439 SP1 TRANSFAC yes 81737023
chr2 232554433 232554443 SP1 JASPAR yes 81737024
chr2 232554434 232554441 SP1 TRANSFAC yes 81737025
chr2 232554435 232554440 SP1 TRANSFAC yes 81737026
chr2 232554435 232554441 SP1 TRANSFAC yes 81737027
chr2 232554435 232554442 SP1 TRANSFAC yes 81737028
chr2 232554437 232554451 ZIC1 JASPAR yes 81737029
chr2 232554437 232554452 ZIC3 JASPAR yes 81737030
chr2 232554437 232554452 ZIC4 JASPAR yes 81737031
Genes associated with rs4973476[chr2:232554437], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More