EnhancerDB
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Enhancers that have rs5000706[chr17:2753293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs5000706[chr17:2753293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2753287 2753308 IRF1 JASPAR yes 52777105
chr17 2753289 2753310 IRF1 JASPAR yes 52777106
chr17 2753290 2753311 IRF1 JASPAR yes 52777107
chr17 2753291 2753312 IRF1 JASPAR yes 52777108
chr17 2753292 2753307 FOXP1 JASPAR yes 52777109
chr17 2753292 2753313 IRF1 JASPAR yes 52777110
chr17 2753293 2753308 FOXP1 JASPAR yes 52777111
Genes associated with rs5000706[chr17:2753293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More