EnhancerDB
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Enhancers that have rs509235[chr1:234660054]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs509235[chr1:234660054]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 21393809
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 107880091
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 107880092
chr1 234656314 234660388 ZBTB33 GTRD no Lung (A549) 107880094
chr1 234656314 234660388 ZBTB33 GTRD no Lung (A549) 107880095
chr1 234656518 234661086 ZBTB33 GTRD no Lung (A549) 107880098
chr1 234656518 234661086 ZBTB33 GTRD no Lung (A549) 107880099
chr1 234656621 234660270 ZBTB33 GTRD no Lung (A549) 107880102
chr1 234656621 234660270 ZBTB33 GTRD no Lung (A549) 107880103
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 21393830
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 107880109
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 107880110
chr1 234656967 234660453 ZBTB33 GTRD no Lung (A549) 107880117
chr1 234656967 234660453 ZBTB33 GTRD no Lung (A549) 107880118
chr1 234657963 234660479 ZNF274 GTRD no Liver (HepG2) 21393916
chr1 234657963 234660479 ZNF274 GTRD no Liver (HepG2) 107880131
chr1 234657963 234660479 ZNF274 GTRD no Liver (HepG2) 107880132
chr1 234659101 234660101 ZNF274 GTRD no Bone Marrow (K562) 21393957
chr1 234659101 234660101 ZNF274 GTRD no Bone Marrow (K562) 107880190
chr1 234659110 234660154 ZNF274 GTRD no Cervix (HeLa-S3) 21393958
chr1 234659110 234660154 ZNF274 GTRD no Cervix (HeLa-S3) 107880191
chr1 234659156 234660066 ZBTB33 GTRD no Lung (A549) 107880193
chr1 234659171 234660113 ZBTB33 GTRD no Lung (A549) 107880194
chr1 234659192 234660185 ZNF274 GTRD no Cervix (HeLa-S3) 21393959
chr1 234659192 234660185 ZNF274 GTRD no Cervix (HeLa-S3) 107880196
chr1 234659219 234661050 ZNF274 GTRD no Bone Marrow (K562) 21393963
chr1 234659219 234661050 ZNF274 GTRD no Bone Marrow (K562) 107880201
chr1 234659239 234660098 ZBTB33 GTRD no Lung (A549) 107880205
chr1 234659268 234660063 ZNF274 GTRD no Cervix (HeLa-S3) 21393968
chr1 234659268 234660063 ZNF274 GTRD no Cervix (HeLa-S3) 107880212
chr1 234659275 234660056 ZNF274 GTRD no Bone Marrow (K562) 21393973
chr1 234659275 234660056 ZNF274 GTRD no Bone Marrow (K562) 107880217
chr1 234659311 234660839 ZBTB33 GTRD no Lung (A549) 107880231
chr1 234659332 234660058 ZBTB33 GTRD no Lung (A549) 107880248
chr1 234659333 234660449 ZBTB33 GTRD no Lung (A549) 107880249
chr1 234659340 234660058 GATA1 UCSC Txn Factor no Conserved 107880256
chr1 234659345 234660075 ZBTB33 GTRD no Brain (SK-N-SH) 21394005
chr1 234659345 234660075 ZBTB33 GTRD no Brain (SK-N-SH) 107880261
chr1 234659349 234660112 ZNF274 GTRD no Cervix (HeLa-S3) 21394007
chr1 234659349 234660112 ZNF274 GTRD no Cervix (HeLa-S3) 107880265
chr1 234659350 234660087 ZNF274 GTRD no Liver (HepG2) 21394008
chr1 234659350 234660087 ZNF274 GTRD no Liver (HepG2) 107880266
chr1 234659357 234660105 ZNF274 GTRD no Bone Marrow (K562) 21394012
chr1 234659357 234660105 ZNF274 GTRD no Bone Marrow (K562) 107880274
chr1 234659367 234660070 ZNF274 GTRD no Liver (HepG2) 21394018
chr1 234659367 234660070 ZNF274 GTRD no Liver (HepG2) 107880281
chr1 234659378 234660286 ZBTB33 GTRD no Lung (A549) 107880286
chr1 234659384 234660118 ZBTB33 GTRD no Lung (A549) 107880290
chr1 234659423 234660332 ZBTB33 GTRD no Brain (SK-N-SH) 21394032
chr1 234659423 234660332 ZBTB33 GTRD no Brain (SK-N-SH) 107880305
chr1 234659428 234660064 ZNF274 GTRD no Bone Marrow (K562) 21394033
chr1 234659428 234660064 ZNF274 GTRD no Bone Marrow (K562) 107880306
chr1 234659437 234660057 ZNF274 GTRD no Bone Marrow (K562) 21394036
chr1 234659437 234660057 ZNF274 GTRD no Bone Marrow (K562) 107880309
chr1 234659459 234660098 ZBTB33 GTRD no Lung (A549) 107880317
chr1 234659465 234660112 ZBTB33 GTRD no Lung (A549) 107880319
chr1 234659470 234660263 ZBTB33 GTRD no Brain (SK-N-SH) 21394046
chr1 234659470 234660263 ZBTB33 GTRD no Brain (SK-N-SH) 107880321
chr1 234659501 234660069 ZBTB33 GTRD no Lung (A549) 107880328
chr1 234659508 234660109 ZBTB33 GTRD no Brain (SK-N-SH) 21394053
chr1 234659508 234660109 ZBTB33 GTRD no Brain (SK-N-SH) 107880329
chr1 234659648 234660280 ZNF274 GTRD no Blood (GM12878) 107880335
chr1 234659672 234660108 ZNF274 GTRD no Liver (HepG2) 21394056
chr1 234659672 234660108 ZNF274 GTRD no Liver (HepG2) 107880336
chr1 234660044 234660058 PAX6 JASPAR yes 36283402
chr1 234660049 234660063 POU4F1 JASPAR yes 36283403
chr1 234660049 234660065 POU4F2 JASPAR yes 36283404
chr1 234660049 234660065 POU4F3 JASPAR yes 36283405
chr1 234660050 234660066 POU4F3 JASPAR yes 36283406
chr1 234660052 234660066 POU4F1 JASPAR yes 36283407
Genes associated with rs509235[chr1:234660054], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More