EnhancerDB
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  3. rs527250300[chr3:58038213]
Enhancers that have rs527250300[chr3:58038213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr3 58038147 58038335 vista41109
VISTA
Transcript factors that have rs527250300[chr3:58038213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58037988 58038444 JUND UCSC Txn Factor no Conserved 108529382
chr3 58038031 58038398 JUN UCSC Txn Factor no Conserved 108529383
chr3 58038058 58038357 FOSL2 UCSC Txn Factor no Conserved 108529384
chr3 58038079 58038392 FOS UCSC Txn Factor no Conserved 108529385
chr3 58038199 58038213 TLX1 JASPAR yes 2669924
chr3 58038199 58038213 TLX1 JASPAR yes 70990811
chr3 58038203 58038213 SP1 JASPAR yes 2669925
chr3 58038203 58038213 SP1 JASPAR yes 70990812
chr3 58038211 58038222 FOSL2 JASPAR yes 2669926
chr3 58038211 58038222 JUNB JASPAR yes 2669927
chr3 58038211 58038222 FOSL2 JASPAR yes 70990813
chr3 58038211 58038222 JUNB JASPAR yes 70990814
chr3 58038212 58038220 FOXC1 JASPAR yes 2669928
chr3 58038212 58038220 FOXC1 JASPAR yes 70990815
chr3 58038212 58038223 FOSL1 JASPAR yes 2669929
chr3 58038212 58038223 FOSL1 JASPAR yes 70990816
Genes associated with rs527250300[chr3:58038213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More