EnhancerDB
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  3. rs527445972[chr1:27780101]
Enhancers that have rs527445972[chr1:27780101]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs527445972[chr1:27780101]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27780099 27780114 FOXP1 JASPAR yes 27696272
chr1 27780100 27780115 FOXP1 JASPAR yes 27696273
chr1 27780101 27780116 FOXP1 JASPAR yes 27696274
chr1 27780101 27780122 IRF1 JASPAR yes 27696275
Genes associated with rs527445972[chr1:27780101], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More