EnhancerDB
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  3. rs527730815[chr17:80502849]
Enhancers that have rs527730815[chr17:80502849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs527730815[chr17:80502849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80502834 80502849 HNF1A JASPAR yes 56372872
chr17 80502838 80502849 HOXA10 JASPAR yes 56372878
chr17 80502840 80502861 IRF1 JASPAR yes 56372887
chr17 80502842 80502857 FOXP1 JASPAR yes 56372888
chr17 80502843 80502858 FOXP1 JASPAR yes 56372889
chr17 80502844 80502850 TBP TRANSFAC yes 56372890
chr17 80502845 80502860 FOXP1 JASPAR yes 56372891
Genes associated with rs527730815[chr17:80502849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More