EnhancerDB
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  3. rs527823961[chr5:77800642]
Enhancers that have rs527823961[chr5:77800642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
chr5 77800435 77801147 vista48136
VISTA
Transcript factors that have rs527823961[chr5:77800642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77800638 77800652 NR2F1 JASPAR yes 63593739
chr5 77800638 77800652 NR2F1 JASPAR yes 70668038
chr5 77800639 77800649 SP1 JASPAR yes 63593740
chr5 77800639 77800649 SP1 JASPAR yes 70668039
Genes associated with rs527823961[chr5:77800642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More