EnhancerDB
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  3. rs527895563[chr1:24623960]
Enhancers that have rs527895563[chr1:24623960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs527895563[chr1:24623960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24623954 24623969 MEF2C JASPAR yes 27497592
chr1 24623956 24623971 FOXP1 JASPAR yes 27497593
chr1 24623957 24623972 FOXP1 JASPAR yes 27497594
chr1 24623958 24623964 TBP TRANSFAC yes 27497595
Genes associated with rs527895563[chr1:24623960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More