EnhancerDB
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  3. rs527932954[chr1:234670086]
Enhancers that have rs527932954[chr1:234670086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs527932954[chr1:234670086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234669653 234670097 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21394133
chr1 234669653 234670097 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107880378
chr1 234669764 234670094 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21394136
chr1 234669764 234670094 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107880383
chr1 234669836 234670132 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21394138
chr1 234669836 234670132 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107880385
chr1 234669903 234670419 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21394139
chr1 234669903 234670419 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107880386
chr1 234670081 234670096 FOXP1 JASPAR yes 36284925
chr1 234670081 234670096 MEF2C JASPAR yes 36284926
chr1 234670083 234670095 MEF2A JASPAR yes 36284927
Genes associated with rs527932954[chr1:234670086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More