EnhancerDB
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  3. rs527952649[chr1:19782385]
Enhancers that have rs527952649[chr1:19782385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs527952649[chr1:19782385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19782380 19782390 HOXA13 JASPAR yes 27192778
chr1 19782380 19782390 HOXB13 JASPAR yes 27192779
chr1 19782380 19782390 HOXD13 JASPAR yes 27192780
chr1 19782380 19782391 HOXC13 JASPAR yes 27192781
chr1 19782384 19782388 TEAD2 TRANSFAC yes 27192782
Genes associated with rs527952649[chr1:19782385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More