EnhancerDB
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  3. rs528035094[chr16:4341020]
Enhancers that have rs528035094[chr16:4341020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs528035094[chr16:4341020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4339982 4341093 ZNF143 GTRD no Epithelial (MCF-7) 21686384
chr16 4340215 4341102 TCF7L2 GTRD no Colon (HCT116) 21686396
chr16 4340328 4342002 ZNF143 GTRD no Epithelial (MCF-7) 21686418
chr16 4340795 4341627 ZNF143 GTRD no Epithelial (MCF-7) 21686430
chr16 4340808 4341968 ZNF143 GTRD no Epithelial (MCF-7) 21686431
chr16 4340967 4341866 TCF7L2 GTRD no Colon (HCT116) 21686432
chr16 4340991 4341388 ZNF143 GTRD no Epithelial (MCF-7) 21686433
chr16 4341016 4341031 ZIC3 JASPAR yes 9267295
chr16 4341016 4341031 ZIC4 JASPAR yes 9267296
chr16 4341017 4341031 ZIC1 JASPAR yes 9267297
Genes associated with rs528035094[chr16:4341020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More