EnhancerDB
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  3. rs528040593[chr1:27743671]
Enhancers that have rs528040593[chr1:27743671]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs528040593[chr1:27743671]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27743669 27743673 YY1 TRANSFAC yes 27691272
chr1 27743671 27743683 FOXC2 JASPAR yes 27691273
chr1 27743671 27743685 FOXF2 JASPAR yes 27691274
Genes associated with rs528040593[chr1:27743671], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More