EnhancerDB
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  3. rs528390282[chr3:58047813]
Enhancers that have rs528390282[chr3:58047813]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs528390282[chr3:58047813]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58047810 58047820 HOXA13 JASPAR yes 2671371
chr3 58047810 58047820 HOXB13 JASPAR yes 2671372
chr3 58047810 58047820 HOXD13 JASPAR yes 2671373
chr3 58047811 58047815 YY1 TRANSFAC yes 2671374
chr3 58047811 58047826 HNF1A JASPAR yes 2671375
chr3 58047811 58047832 IRF1 JASPAR yes 2671376
Genes associated with rs528390282[chr3:58047813], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More