EnhancerDB
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  3. rs528464193[chr1:229548009]
Enhancers that have rs528464193[chr1:229548009]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229540746 229550075 enh12766
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Stomach Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 229547907 229548085 vista5473
VISTA
Transcript factors that have rs528464193[chr1:229548009]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229547977 229548157 FOXA1 UCSC Txn Factor no Conserved 107878156
chr1 229547983 229548171 GATA3 UCSC Txn Factor no Conserved 107878157
chr1 229548007 229548013 LEF1 TRANSFAC yes 35987457
chr1 229548007 229548013 SOX10 JASPAR yes 35987458
chr1 229548007 229548013 LEF1 TRANSFAC yes 118476754
chr1 229548007 229548013 SOX10 JASPAR yes 118476755
Genes associated with rs528464193[chr1:229548009], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More