EnhancerDB
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  3. rs528537940[chr16:89410569]
Enhancers that have rs528537940[chr16:89410569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr16 89410388 89410772 vista23565
VISTA
Transcript factors that have rs528537940[chr16:89410569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 21738295
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 21738296
chr16 89408636 89411957 ZNF274 GTRD no Blood (GM12878) 108225756
chr16 89410090 89411053 ZNF274 GTRD no Blood (GM12878) 21738297
chr16 89410090 89411053 ZNF274 GTRD no Blood (GM12878) 108225757
chr16 89410142 89411651 ZNF143 GTRD no Epithelial (MCF-7) 21738298
chr16 89410142 89411651 ZNF143 GTRD no Epithelial (MCF-7) 108225758
chr16 89410149 89411882 ZNF143 GTRD no Epithelial (MCF-7) 21738299
chr16 89410149 89411882 ZNF143 GTRD no Epithelial (MCF-7) 108225759
chr16 89410155 89410595 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108225760
chr16 89410162 89411482 ZNF143 GTRD no Epithelial (MCF-7) 21738300
chr16 89410162 89411482 ZNF143 GTRD no Epithelial (MCF-7) 108225761
chr16 89410206 89411539 ZNF143 GTRD no Epithelial (MCF-7) 21738301
chr16 89410206 89411539 ZNF143 GTRD no Epithelial (MCF-7) 108225762
chr16 89410280 89411766 ZNF274 GTRD no Blood (GM12878) 21738302
chr16 89410280 89411766 ZNF274 GTRD no Blood (GM12878) 108225763
chr16 89410304 89410700 ZNF143 GTRD no Epithelial (MCF-7) 21738303
chr16 89410304 89410700 ZNF143 GTRD no Epithelial (MCF-7) 108225764
chr16 89410313 89411619 ZNF143 GTRD no Epithelial (MCF-7) 21738304
chr16 89410313 89411619 ZNF143 GTRD no Epithelial (MCF-7) 108225765
chr16 89410316 89411565 ZNF143 GTRD no Epithelial (MCF-7) 21738305
chr16 89410316 89411565 ZNF143 GTRD no Epithelial (MCF-7) 108225766
chr16 89410367 89411794 ZNF143 GTRD no Epithelial (MCF-7) 21738306
chr16 89410367 89411794 ZNF143 GTRD no Epithelial (MCF-7) 108225767
chr16 89410370 89411798 ZNF143 GTRD no Epithelial (MCF-7) 21738307
chr16 89410370 89411798 ZNF143 GTRD no Epithelial (MCF-7) 108225768
chr16 89410383 89411616 ZNF143 GTRD no Epithelial (MCF-7) 21738308
chr16 89410383 89411616 ZNF143 GTRD no Epithelial (MCF-7) 108225769
chr16 89410409 89410674 ZNF143 GTRD no Epithelial (MCF-7) 21738309
chr16 89410409 89410674 ZNF143 GTRD no Epithelial (MCF-7) 108225770
chr16 89410423 89411348 ZNF143 GTRD no Epithelial (MCF-7) 21738310
chr16 89410423 89411348 ZNF143 GTRD no Epithelial (MCF-7) 108225771
chr16 89410464 89411667 ZNF274 GTRD no Liver (HepG2) 21738311
chr16 89410464 89411667 ZNF274 GTRD no Liver (HepG2) 108225772
chr16 89410535 89411190 ZNF143 GTRD no Epithelial (MCF-7) 21738312
chr16 89410535 89411190 ZNF143 GTRD no Epithelial (MCF-7) 108225773
chr16 89410538 89411492 ZNF274 GTRD no Blood (GM12878) 21738313
chr16 89410538 89411492 ZNF274 GTRD no Blood (GM12878) 108225774
chr16 89410557 89411142 ZNF274 GTRD no Blood (GM12878) 21738314
chr16 89410557 89411142 ZNF274 GTRD no Blood (GM12878) 108225775
chr16 89410567 89411237 ZNF274 GTRD no Liver (HepG2) 21738315
chr16 89410567 89411237 ZNF274 GTRD no Liver (HepG2) 108225776
chr16 89410568 89410572 LFA1 TRANSFAC yes 12334003
chr16 89410568 89410572 LFA1 TRANSFAC yes 49421414
Genes associated with rs528537940[chr16:89410569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More