EnhancerDB
  1. Home
  2. SNP
  3. rs528990576[chr1:39596977]
Enhancers that have rs528990576[chr1:39596977]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs528990576[chr1:39596977]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39596977 39596987 MAX JASPAR yes 28255509
chr1 39596977 39596988 USF2 JASPAR yes 28255510
chr1 39596977 39596989 HES5 JASPAR yes 28255511
chr1 39596977 39596989 HES7 JASPAR yes 28255512
Genes associated with rs528990576[chr1:39596977], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More