EnhancerDB
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Enhancers that have rs529040006[chr19:11254327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11246465 11256159 enh17922
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
chr19 11251931 11254703 vista790
VISTA
Transcript factors that have rs529040006[chr19:11254327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 21849614
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 107690072
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 108384626
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 108384627
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 107690074
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 108384629
chr19 11252571 11254390 POLR2A UCSC Txn Factor no Conserved 108384630
chr19 11252616 11254406 TCF7L2 GTRD no Colon (HCT116) 107690076
chr19 11252616 11254406 TCF7L2 GTRD no Colon (HCT116) 108384632
chr19 11252616 11254406 TCF7L2 GTRD no Colon (HCT116) 108384633
chr19 11253372 11254474 TCF7L2 GTRD no Colon (HCT116) 107690129
chr19 11253372 11254474 TCF7L2 GTRD no Colon (HCT116) 108384686
chr19 11253372 11254474 TCF7L2 GTRD no Colon (HCT116) 108384687
chr19 11253718 11254337 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21849644
chr19 11253718 11254337 E2F1 UCSC Txn Factor no Conserved 107690136
chr19 11253718 11254337 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107690137
chr19 11253718 11254337 E2F1 UCSC Txn Factor no Conserved 108384695
chr19 11253718 11254337 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108384696
chr19 11253727 11254330 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849645
chr19 11253727 11254330 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107690138
chr19 11253727 11254330 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108384697
chr19 11253755 11254359 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849646
chr19 11253755 11254359 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107690139
chr19 11253755 11254359 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108384698
chr19 11253806 11255179 ZNF143 GTRD no Epithelial (MCF-7) 21849649
chr19 11253806 11255179 ZNF143 GTRD no Epithelial (MCF-7) 107690142
chr19 11253806 11255179 ZNF143 GTRD no Epithelial (MCF-7) 108384701
chr19 11253809 11254333 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107690143
chr19 11253809 11254333 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108384702
chr19 11253814 11254390 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21849651
chr19 11253814 11254390 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107690145
chr19 11253814 11254390 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108384704
chr19 11253830 11254334 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849653
chr19 11253830 11254334 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107690147
chr19 11253830 11254334 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108384706
chr19 11253840 11254416 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107690148
chr19 11253840 11254416 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108384707
chr19 11253911 11254367 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107690154
chr19 11253911 11254367 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384713
chr19 11253913 11254389 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849657
chr19 11253913 11254389 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107690155
chr19 11253913 11254389 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108384714
chr19 11253915 11254371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849658
chr19 11253915 11254371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107690156
chr19 11253915 11254371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108384715
chr19 11253947 11254664 ZNF143 GTRD no Epithelial (MCF-7) 21849661
chr19 11253947 11254664 ZNF143 GTRD no Epithelial (MCF-7) 107690161
chr19 11253947 11254664 ZNF143 GTRD no Epithelial (MCF-7) 108384720
chr19 11253953 11254329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849663
chr19 11253953 11254329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107690163
chr19 11253953 11254329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108384722
chr19 11253964 11254404 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107690166
chr19 11253964 11254404 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384725
chr19 11253977 11254347 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849666
chr19 11253977 11254347 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107690171
chr19 11253977 11254347 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108384730
chr19 11254024 11254354 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849671
chr19 11254024 11254354 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107690183
chr19 11254024 11254354 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108384742
chr19 11254029 11254333 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21849672
chr19 11254029 11254333 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107690185
chr19 11254029 11254333 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108384744
chr19 11254052 11254615 ZNF143 GTRD no Epithelial (MCF-7) 21849673
chr19 11254052 11254615 ZNF143 GTRD no Epithelial (MCF-7) 107690187
chr19 11254052 11254615 ZNF143 GTRD no Epithelial (MCF-7) 108384746
chr19 11254060 11254532 ZNF274 GTRD no Bone Marrow (K562) 21849674
chr19 11254060 11254532 ZNF274 GTRD no Bone Marrow (K562) 107690188
chr19 11254060 11254532 ZNF274 GTRD no Bone Marrow (K562) 108384747
chr19 11254073 11254409 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107690189
chr19 11254073 11254409 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384748
chr19 11254075 11254355 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107690190
chr19 11254075 11254355 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108384749
chr19 11254112 11254594 ZNF274 GTRD no Bone Marrow (K562) 21849675
chr19 11254112 11254594 ZNF274 GTRD no Bone Marrow (K562) 107690191
chr19 11254112 11254594 ZNF274 GTRD no Bone Marrow (K562) 108384750
chr19 11254122 11254512 ZNF143 GTRD no Epithelial (MCF-7) 21849676
chr19 11254122 11254512 ZNF143 GTRD no Epithelial (MCF-7) 107690192
chr19 11254122 11254512 ZNF143 GTRD no Epithelial (MCF-7) 108384751
chr19 11254154 11254414 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107690193
chr19 11254154 11254414 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384752
chr19 11254186 11254486 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107690194
chr19 11254186 11254486 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384753
chr19 11254189 11254479 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107690195
chr19 11254189 11254479 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384754
chr19 11254199 11254459 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107690196
chr19 11254199 11254459 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108384755
chr19 11254324 11254336 ZBTB7B JASPAR yes 108571795
chr19 11254324 11254336 ZBTB7B JASPAR yes 112458151
chr19 11254327 11254341 PLAG1 JASPAR yes 108571796
chr19 11254327 11254341 PLAG1 JASPAR yes 112458152
Genes associated with rs529040006[chr19:11254327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More