EnhancerDB
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  3. rs529202723[chr6:88426477]
Enhancers that have rs529202723[chr6:88426477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs529202723[chr6:88426477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88426456 88426477 IRF1 JASPAR yes 103323893
chr6 88426457 88426478 IRF1 JASPAR yes 103323895
chr6 88426458 88426479 IRF1 JASPAR yes 103323897
chr6 88426459 88426480 IRF1 JASPAR yes 103323899
chr6 88426460 88426481 IRF1 JASPAR yes 103323901
chr6 88426461 88426482 IRF1 JASPAR yes 103323903
chr6 88426462 88426477 FOXP1 JASPAR yes 103323904
chr6 88426462 88426483 IRF1 JASPAR yes 103323905
chr6 88426463 88426478 FOXP1 JASPAR yes 103323906
chr6 88426463 88426484 IRF1 JASPAR yes 103323907
chr6 88426464 88426479 FOXP1 JASPAR yes 103323908
chr6 88426465 88426486 IRF1 JASPAR yes 103323909
chr6 88426466 88426481 FOXP1 JASPAR yes 103323910
chr6 88426467 88426482 STAT2 JASPAR yes 103323911
chr6 88426467 88426488 IRF1 JASPAR yes 103323912
chr6 88426468 88426483 FOXP1 JASPAR yes 103323913
chr6 88426469 88426490 IRF1 JASPAR yes 103323914
chr6 88426471 88426492 IRF1 JASPAR yes 103323915
chr6 88426473 88426488 PRDM1 JASPAR yes 103323916
chr6 88426475 88426490 PRDM1 JASPAR yes 103323917
Genes associated with rs529202723[chr6:88426477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More