EnhancerDB
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  3. rs529311620[chr1:24619060]
Enhancers that have rs529311620[chr1:24619060]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs529311620[chr1:24619060]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24619054 24619066 PKNOX1 JASPAR yes 27496881
chr1 24619054 24619066 TGIF1 JASPAR yes 27496882
chr1 24619055 24619064 SNAI2 JASPAR yes 27496883
chr1 24619055 24619065 FIGLA JASPAR yes 27496884
chr1 24619055 24619065 ID4 JASPAR yes 27496885
chr1 24619055 24619065 TCF3 JASPAR yes 27496886
chr1 24619055 24619065 TCF4 JASPAR yes 27496887
chr1 24619058 24619072 NR2F1 JASPAR yes 27496888
Genes associated with rs529311620[chr1:24619060], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More