EnhancerDB
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  3. rs529448901[chr17:55548638]
Enhancers that have rs529448901[chr17:55548638]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs529448901[chr17:55548638]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55548626 55548642 E2F2 JASPAR yes 54958459
chr17 55548632 55548653 IRF1 JASPAR yes 54958460
chr17 55548634 55548649 PRDM1 JASPAR yes 54958461
chr17 55548634 55548649 STAT2 JASPAR yes 54958462
chr17 55548635 55548656 IRF1 JASPAR yes 54958463
chr17 55548636 55548657 IRF1 JASPAR yes 54958464
chr17 55548637 55548652 FOXP1 JASPAR yes 54958465
chr17 55548637 55548658 IRF1 JASPAR yes 54958466
chr17 55548638 55548653 FOXP1 JASPAR yes 54958467
chr17 55548638 55548659 IRF1 JASPAR yes 54958468
Genes associated with rs529448901[chr17:55548638], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More