EnhancerDB
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  3. rs529449912[chr12:125246090]
Enhancers that have rs529449912[chr12:125246090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs529449912[chr12:125246090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125245882 125247075 AR GTRD no Prostate (PC-3) 21582885
chr12 125245882 125247075 AR GTRD no Prostate (PC-3) 108069860
chr12 125245974 125246334 ZNF143 GTRD no Epithelial (MCF-7) 21582886
chr12 125245974 125246334 ZNF143 GTRD no Epithelial (MCF-7) 108069861
chr12 125246013 125246666 ZNF143 GTRD no Epithelial (MCF-7) 21582887
chr12 125246013 125246666 ZNF143 GTRD no Epithelial (MCF-7) 108069862
chr12 125246076 125246091 FOXP1 JASPAR yes 124418967
chr12 125246077 125246092 FOXP1 JASPAR yes 124418968
chr12 125246078 125246093 FOXP1 JASPAR yes 124418969
chr12 125246079 125246094 FOXP1 JASPAR yes 124418970
chr12 125246080 125246095 FOXP1 JASPAR yes 124418971
chr12 125246080 125246101 IRF1 JASPAR yes 124418972
chr12 125246081 125246096 FOXP1 JASPAR yes 124418973
chr12 125246081 125246102 IRF1 JASPAR yes 124418974
chr12 125246082 125246097 FOXP1 JASPAR yes 124418975
chr12 125246090 125246104 ONECUT2 JASPAR yes 124418976
chr12 125246090 125246104 ONECUT3 JASPAR yes 124418977
Genes associated with rs529449912[chr12:125246090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More