EnhancerDB
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  3. rs529449916[chr1:41853475]
Enhancers that have rs529449916[chr1:41853475]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs529449916[chr1:41853475]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41853471 41853482 TFAP2A JASPAR yes 28383598
chr1 41853471 41853482 TFAP2B JASPAR yes 28383599
chr1 41853471 41853482 TFAP2C JASPAR yes 28383600
Genes associated with rs529449916[chr1:41853475], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More