EnhancerDB
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  3. rs529461215[chr17:56009642]
Enhancers that have rs529461215[chr17:56009642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs529461215[chr17:56009642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56009639 56009654 FOXP1 JASPAR yes 55001085
chr17 56009640 56009655 FOXP1 JASPAR yes 55001086
chr17 56009641 56009656 FOXP1 JASPAR yes 55001087
chr17 56009641 56009662 IRF1 JASPAR yes 55001088
chr17 56009642 56009657 FOXP1 JASPAR yes 55001089
chr17 56009642 56009663 IRF1 JASPAR yes 55001090
Genes associated with rs529461215[chr17:56009642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More