EnhancerDB
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  3. rs529827543[chr6:30742886]
Enhancers that have rs529827543[chr6:30742886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs529827543[chr6:30742886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30742866 30742887 IRF1 JASPAR yes 101047630
chr6 30742871 30742886 FOXP1 JASPAR yes 101047633
chr6 30742885 30742891 TBP TRANSFAC yes 101047634
Genes associated with rs529827543[chr6:30742886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More