EnhancerDB
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  3. rs529954956[chr1:173090706]
Enhancers that have rs529954956[chr1:173090706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173089145 173100155 enh12380
Skin (Keratinocyte) Liver (HepG2) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs529954956[chr1:173090706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173090701 173090713 MEF2D JASPAR yes 33181573
chr1 173090703 173090717 ONECUT2 JASPAR yes 33181574
chr1 173090703 173090717 ONECUT3 JASPAR yes 33181575
chr1 173090703 173090718 FOXP1 JASPAR yes 33181576
chr1 173090704 173090719 FOXA1 JASPAR yes 33181577
chr1 173090705 173090716 FOXB1 JASPAR yes 33181578
chr1 173090705 173090716 FOXC1 JASPAR yes 33181579
chr1 173090705 173090717 FOXC2 JASPAR yes 33181580
chr1 173090706 173090718 FOXI1 JASPAR yes 33181581
Genes associated with rs529954956[chr1:173090706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More