EnhancerDB
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  3. rs529955078[chr2:102349959]
Enhancers that have rs529955078[chr2:102349959]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs529955078[chr2:102349959]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102349955 102349959 YY1 TRANSFAC yes 75832445
chr2 102349958 102349968 TBX21 JASPAR yes 75832446
chr2 102349958 102349969 TBX20 JASPAR yes 75832447
chr2 102349958 102349969 TBX2 JASPAR yes 75832448
chr2 102349958 102349971 EOMES JASPAR yes 75832449
chr2 102349959 102349967 MGA JASPAR yes 75832450
chr2 102349959 102349967 TBX15 JASPAR yes 75832451
chr2 102349959 102349967 TBX1 JASPAR yes 75832452
chr2 102349959 102349967 TBX4 JASPAR yes 75832453
chr2 102349959 102349967 TBX5 JASPAR yes 75832454
chr2 102349959 102349969 TBR1 JASPAR yes 75832455
Genes associated with rs529955078[chr2:102349959], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More