EnhancerDB
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  3. rs530053833[chr2:232558540]
Enhancers that have rs530053833[chr2:232558540]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530053833[chr2:232558540]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232558533 232558543 SP1 JASPAR yes 81737537
chr2 232558534 232558544 SP1 JASPAR yes 81737538
chr2 232558536 232558541 SP1 TRANSFAC yes 81737539
chr2 232558540 232558554 PLAG1 JASPAR yes 81737540
Genes associated with rs530053833[chr2:232558540], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More