EnhancerDB
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  3. rs530194852[chr17:48964961]
Enhancers that have rs530194852[chr17:48964961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs530194852[chr17:48964961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48964104 48965074 TCF7L2 GTRD no Colon (HCT116) 21770258
chr17 48964944 48964965 ZNF263 JASPAR yes 54729267
chr17 48964947 48964968 ZNF263 JASPAR yes 54729268
chr17 48964949 48964970 ZNF263 JASPAR yes 54729270
chr17 48964953 48964963 ZNF740 JASPAR yes 54729271
chr17 48964953 48964967 PLAG1 JASPAR yes 54729272
chr17 48964955 48964964 SP1 TRANSFAC yes 54729273
chr17 48964955 48964965 SP1 JASPAR yes 54729274
chr17 48964955 48964976 ZNF263 JASPAR yes 54729275
chr17 48964956 48964966 SP1 JASPAR yes 54729276
chr17 48964957 48964963 MAZ TRANSFAC yes 54729277
chr17 48964957 48964967 SP1 JASPAR yes 54729278
chr17 48964958 48964968 MZF1 JASPAR yes 54729279
Genes associated with rs530194852[chr17:48964961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More