EnhancerDB
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  3. rs530238576[chr19:5946551]
Enhancers that have rs530238576[chr19:5946551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530238576[chr19:5946551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5946540 5946553 NFKB1 JASPAR yes 112246511
chr19 5946540 5946553 NFKB2 JASPAR yes 112246512
chr19 5946541 5946552 NFKB1 JASPAR yes 112246513
chr19 5946551 5946560 THAP1 JASPAR yes 112246514
Genes associated with rs530238576[chr19:5946551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More