EnhancerDB
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  3. rs530259678[chr17:79547105]
Enhancers that have rs530259678[chr17:79547105]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79539405 79553215 enh32380
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs530259678[chr17:79547105]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79546234 79547121 TCF7L2 GTRD no Colon (HCT116) 21798208
chr17 79546234 79547121 TCF7L2 GTRD no Colon (HCT116) 108310083
chr17 79546920 79547803 TCF7L2 GTRD no Colon (HCT116) 21798209
chr17 79546920 79547803 TCF7L2 GTRD no Colon (HCT116) 108310084
chr17 79547084 79547105 ZNF263 JASPAR yes 56334885
chr17 79547090 79547111 ZNF263 JASPAR yes 56334888
chr17 79547091 79547112 ZNF263 JASPAR yes 56334889
Genes associated with rs530259678[chr17:79547105], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More