EnhancerDB
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  3. rs530380342[chr1:154380746]
Enhancers that have rs530380342[chr1:154380746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 154380711 154381076 vista3372
VISTA
Transcript factors that have rs530380342[chr1:154380746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154380742 154380757 ZIC3 JASPAR yes 32289087
chr1 154380742 154380757 ZIC3 JASPAR yes 118372583
chr1 154380743 154380754 E2F4 JASPAR yes 32289088
chr1 154380743 154380754 E2F6 JASPAR yes 32289089
chr1 154380743 154380754 E2F4 JASPAR yes 118372584
chr1 154380743 154380754 E2F6 JASPAR yes 118372585
chr1 154380744 154380755 E2F1 JASPAR yes 32289090
chr1 154380744 154380755 E2F1 JASPAR yes 118372586
Genes associated with rs530380342[chr1:154380746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More