EnhancerDB
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  3. rs530398566[chr17:41529889]
Enhancers that have rs530398566[chr17:41529889]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs530398566[chr17:41529889]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41527431 41531265 ZBTB33 GTRD no Lung (A549) 21760503
chr17 41528085 41531278 ZNF143 GTRD no Epithelial (MCF-7) 21760532
chr17 41528148 41531482 ZNF143 GTRD no Epithelial (MCF-7) 21760543
chr17 41528847 41531542 ZNF274 GTRD no Cervix (HeLa-S3) 21760554
chr17 41528887 41531563 ZNF274 GTRD no Cervix (HeLa-S3) 21760556
chr17 41528906 41531260 ZNF143 GTRD no Epithelial (MCF-7) 21760557
chr17 41528913 41531303 ZNF143 GTRD no Epithelial (MCF-7) 21760558
chr17 41528934 41530584 ZNF143 GTRD no Epithelial (MCF-7) 21760560
chr17 41528936 41530806 ZNF143 GTRD no Epithelial (MCF-7) 21760561
chr17 41528942 41531433 ZNF143 GTRD no Epithelial (MCF-7) 21760562
chr17 41528959 41530589 ZNF143 GTRD no Epithelial (MCF-7) 21760564
chr17 41528976 41529965 ZNF274 GTRD no Cervix (HeLa-S3) 21760566
chr17 41528984 41530054 ZNF143 GTRD no Epithelial (MCF-7) 21760567
chr17 41528993 41530924 ZNF143 GTRD no Epithelial (MCF-7) 21760569
chr17 41528998 41531380 ZNF274 GTRD no Cervix (HeLa-S3) 21760570
chr17 41529012 41530609 ZNF143 GTRD no Epithelial (MCF-7) 21760571
chr17 41529017 41529905 ZNF143 GTRD no Epithelial (MCF-7) 21760572
chr17 41529017 41530566 ZNF143 GTRD no Epithelial (MCF-7) 21760573
chr17 41529025 41531563 ZNF274 GTRD no Cervix (HeLa-S3) 21760574
chr17 41529035 41530104 ZNF143 GTRD no Epithelial (MCF-7) 21760575
chr17 41529052 41531322 ZNF143 GTRD no Epithelial (MCF-7) 21760576
chr17 41529086 41531137 ZNF143 GTRD no Epithelial (MCF-7) 21760577
chr17 41529123 41530868 ZBTB33 GTRD no Lung (A549) 21760579
chr17 41529250 41531586 ZBTB33 GTRD no Lung (A549) 21760580
chr17 41529350 41531425 ZNF143 GTRD no Epithelial (MCF-7) 21760581
chr17 41529424 41530918 ZBTB33 GTRD no Lung (A549) 21760582
chr17 41529486 41531288 ZNF274 GTRD no Cervix (HeLa-S3) 21760583
chr17 41529596 41531203 ZNF143 GTRD no Epithelial (MCF-7) 21760584
chr17 41529651 41531065 ZBTB33 GTRD no Lung (A549) 21760585
chr17 41529669 41531168 ZBTB33 GTRD no Lung (A549) 21760586
chr17 41529714 41531265 ZBTB33 GTRD no Lung (A549) 21760587
chr17 41529726 41530603 ZNF274 GTRD no Cervix (HeLa-S3) 21760588
chr17 41529759 41531289 ZNF274 GTRD no Cervix (HeLa-S3) 21760589
chr17 41529761 41530654 ZBTB33 GTRD no Lung (A549) 21760590
chr17 41529812 41531139 ZBTB33 GTRD no Lung (A549) 21760591
chr17 41529814 41530996 ZNF274 GTRD no Cervix (HeLa-S3) 21760592
chr17 41529849 41530607 ZNF143 GTRD no Epithelial (MCF-7) 21760593
chr17 41529849 41530730 ZBTB33 GTRD no Lung (A549) 21760594
chr17 41529857 41530715 ZNF143 GTRD no Epithelial (MCF-7) 21760595
Genes associated with rs530398566[chr17:41529889], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More