EnhancerDB
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  3. rs530425040[chr17:43387393]
Enhancers that have rs530425040[chr17:43387393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs530425040[chr17:43387393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43386787 43387549 ZNF274 GTRD no Cervix (HeLa-S3) 21764403
chr17 43386887 43390033 ZNF274 GTRD no Blood (GM12878) 21764407
chr17 43386887 43390033 ZNF274 GTRD no Blood (GM12878) 108264461
chr17 43386965 43389907 ZNF274 GTRD no Bone Marrow (K562) 21764409
chr17 43386965 43389907 ZNF274 GTRD no Bone Marrow (K562) 108264462
chr17 43387058 43390224 ZNF274 GTRD no Cervix (HeLa-S3) 21764410
chr17 43387058 43390224 ZNF274 GTRD no Cervix (HeLa-S3) 108264463
chr17 43387182 43390265 ZBTB33 GTRD no Lung (A549) 108264464
chr17 43387323 43389910 ZNF274 GTRD no Liver (HepG2) 21764413
chr17 43387323 43389910 ZNF274 GTRD no Liver (HepG2) 108264465
chr17 43387336 43387612 ZNF274 GTRD no Blood (GM12878) 21764414
chr17 43387384 43387396 YY1 JASPAR yes 54442839
chr17 43387387 43387408 IRF1 JASPAR yes 54442840
chr17 43387389 43387410 IRF1 JASPAR yes 54442841
chr17 43387390 43387405 FOXP1 JASPAR yes 54442842
chr17 43387390 43387411 IRF1 JASPAR yes 54442843
chr17 43387391 43387412 IRF1 JASPAR yes 54442844
chr17 43387391 43389511 TCF7L2 GTRD no Colon (HCT116) 21764415
chr17 43387391 43389511 TCF7L2 GTRD no Colon (HCT116) 108264466
chr17 43387392 43387407 FOXP1 JASPAR yes 54442845
chr17 43387392 43387413 IRF1 JASPAR yes 54442846
chr17 43387393 43387408 FOXP1 JASPAR yes 54442847
chr17 43387393 43387414 IRF1 JASPAR yes 54442848
Genes associated with rs530425040[chr17:43387393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More