EnhancerDB
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  3. rs530439684[chr12:65052450]
Enhancers that have rs530439684[chr12:65052450]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65039765 65087550 enh2405
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530439684[chr12:65052450]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65052449 65052458 ZEB1 JASPAR yes 121422160
chr12 65052449 65052464 SCRT1 JASPAR yes 121422161
chr12 65052450 65052460 FIGLA JASPAR yes 121422162
chr12 65052450 65052460 ID4 JASPAR yes 121422163
chr12 65052450 65052460 TCF3 JASPAR yes 121422164
chr12 65052450 65052460 TCF4 JASPAR yes 121422165
Genes associated with rs530439684[chr12:65052450], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More