EnhancerDB
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  3. rs530441628[chr5:171847947]
Enhancers that have rs530441628[chr5:171847947]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171823725 171849015 enh22806
Brain (SK-N-MC) Astrocyte Adrenal Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 171847636 171847998 vista50146
VISTA
Transcript factors that have rs530441628[chr5:171847947]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171847671 171847995 CEBPB UCSC Txn Factor no Conserved 108537462
chr5 171847945 171847960 TFAP2A JASPAR yes 67788027
chr5 171847945 171847960 TFAP2A JASPAR yes 70761698
chr5 171847947 171847962 TFAP2C JASPAR yes 67788028
chr5 171847947 171847962 TFAP2C JASPAR yes 70761699
Genes associated with rs530441628[chr5:171847947], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More