EnhancerDB
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  3. rs530659040[chr1:52094302]
Enhancers that have rs530659040[chr1:52094302]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52082245 52099655 enh11847
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs530659040[chr1:52094302]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52094291 52094305 POU4F1 JASPAR yes 28856183
chr1 52094291 52094307 POU4F3 JASPAR yes 28856184
chr1 52094297 52094307 HOXA13 JASPAR yes 28856185
chr1 52094297 52094307 HOXB13 JASPAR yes 28856186
chr1 52094297 52094307 HOXD13 JASPAR yes 28856187
chr1 52094297 52094308 HOXA10 JASPAR yes 28856188
chr1 52094298 52094307 CDX1 JASPAR yes 28856189
chr1 52094300 52094311 HOXD12 JASPAR yes 28856190
Genes associated with rs530659040[chr1:52094302], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More