EnhancerDB
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  3. rs530768[chr1:39626251]
Enhancers that have rs530768[chr1:39626251]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530768[chr1:39626251]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39626238 39626253 PRDM1 JASPAR yes 28260386
chr1 39626245 39626260 FOXA1 JASPAR yes 28260387
chr1 39626248 39626256 FOXO3 JASPAR yes 28260388
chr1 39626251 39626265 RORA JASPAR yes 28260389
Genes associated with rs530768[chr1:39626251], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More