EnhancerDB
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  3. rs530825869[chr5:172275227]
Enhancers that have rs530825869[chr5:172275227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530825869[chr5:172275227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172275218 172275230 E2F8 JASPAR yes 67834243
chr5 172275224 172275235 FOXP2 JASPAR yes 67834244
chr5 172275225 172275233 FOXO3 JASPAR yes 67834245
Genes associated with rs530825869[chr5:172275227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More