EnhancerDB
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  3. rs530828961[chr6:16333942]
Enhancers that have rs530828961[chr6:16333942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16329544 16348350 enh8975
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530828961[chr6:16333942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16333936 16333947 FOXA1 JASPAR yes 100288536
chr6 16333936 16333951 FOXA1 JASPAR yes 100288537
chr6 16333937 16333946 POU3F4 JASPAR yes 100288538
chr6 16333937 16333946 POU5F1B JASPAR yes 100288539
chr6 16333937 16333949 FOXC2 JASPAR yes 100288540
Genes associated with rs530828961[chr6:16333942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More