EnhancerDB
  1. Home
  2. SNP
  3. rs530870058[chr5:172264198]
Enhancers that have rs530870058[chr5:172264198]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530870058[chr5:172264198]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172264195 172264200 GATA2 JASPAR yes 67832635
chr5 172264198 172264212 SPI1 JASPAR yes 67832636
Genes associated with rs530870058[chr5:172264198], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More